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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015838024.1_cds_XP_016506877.1_20060
CDS Infomation

[gene=LOC107824589] [db_xref=GeneID:107824589] [protein=protein LOW PSII ACCUMULATION 3, chloroplastic-like] [protein_id=XP_016506877.1] [location=complement(join(15003..15062,15223..15303,15381..15463,16267..16327,16423..16525,16612..16670,17285..17370,18055..18166,18464..18526,18621..18713,18850..18880,20093..20460))] [gbkey=CDS]
Sequence

ATGGTTCGTTATATTTCCCTCCACTATCTGTCCAACAACACGAGCCATCAACCAACCATA
GTCATGGCCGTAACCACGGCTTTACAGACCCTCCCTTCTTCCTTCACTCTTCCTCGCTCT
CACCCTTCACATCCCTTTATCTCTTTTTCCTTTTCCCATTTCCCTATTCGCACACTCTTC
CACTCTTCCTCAAGATCAGTACTCCCCAGCTTCAAGGGGGGAATTCAATGCGTCAAGAAA
GAAGCTGACCCAAAGCTCGGCGTCAGTGTTTACAAGCCTAAATCATACCAAGTCCTTGTT
TCTGATGCCGCCAATTCTCTCGCTTTTGCCCTTAATGATGGAAAGACCCGACTCGAAATT
GACTTCCCGCCCTTGCCCACCAGCATTTCTTCTTATAAGGGATCTTCGGATGAGTTCAGT
GATGCCAATATCCAACTTGTACTAGCTGTTGTTCAGAAGCTTCAGGAAAAGAAGGAAACT
AGAGCTTGTGTGGTGTTTCCTGACAAACCTGAAAAGCGTAGGGCCTCCGAGCTTTTCAAA
GCAGCTCTTGACTCGATAGATGGTATTACCATTGGGTCCTTGGATGATATTCCTGGTGGC
GCTGTGACCTCATTCTTCAGATCTGTAAGGAATACACTGGATTTCGATTTTGACGATGAT
AATGAAGGTCGTTGGAAGTCTGACAAGCCTCCTACACTTTATATATTTATCAACTGCAGC
ACTCGTGACCTTGCGTACATTGAGAAGTATGTGGAAAAAATTGCTATGTCAACCCCTAGC
CTCCTTTTCAATCTAGAGCTTGACACCTTGCGCGCTGACCTGGGTATTTTTGGCTTTCCA
CCCAAGGAATTGCATTACCAATTTCTTTCTCAATTCACCCCAGTTTTCTATATTCGAACA
AGAGAGTACTCAAAGACAGTTGCAGTGGCACCTTATATTGTGAACTACAATGGAGCTCTC
TTCCGTCAATATCCTGGGCCTTGGCAGGTGATGCTGAAACAGACAGATGGTTCTTTTGTT
TGTGTGGCAGAAAGCGCAACTCGCTTCACTCTTGGCGAAACCAAGGAAGAACTATTGAGA
GTCCTCGGACTGCAAGAGGAGAAAGGAAGCTCACTTGAATTTCTCAGAAGAGGCTACAAG
ACTGCAACTTGGTGGGAAGAAGATGTTGATTTAGAAGCGTCCTCTGCATGGCGTAGCTGA

Peptide Sequence

PEP ID

XP_016506877.1
PEP Infomation

PREDICTED: protein LOW PSII ACCUMULATION 3, chloroplastic-like [Nicotiana tabacum]
Sequence

MVRYISLHYLSNNTSHQPTIVMAVTTALQTLPSSFTLPRSHPSHPFISFSFSHFPIRTLF
HSSSRSVLPSFKGGIQCVKKEADPKLGVSVYKPKSYQVLVSDAANSLAFALNDGKTRLEI
DFPPLPTSISSYKGSSDEFSDANIQLVLAVVQKLQEKKETRACVVFPDKPEKRRASELFK
AALDSIDGITIGSLDDIPGGAVTSFFRSVRNTLDFDFDDDNEGRWKSDKPPTLYIFINCS
TRDLAYIEKYVEKIAMSTPSLLFNLELDTLRADLGIFGFPPKELHYQFLSQFTPVFYIRT
REYSKTVAVAPYIVNYNGALFRQYPGPWQVMLKQTDGSFVCVAESATRFTLGETKEELLR
VLGLQEEKGSSLEFLRRGYKTATWWEEDVDLEASSAWRS

Transcript Sequence

Gene sequence data has not been registered.